scPhyloX.tools.PhyloCircular.tree ================================= .. py:module:: scPhyloX.tools.PhyloCircular.tree Functions --------- .. autoapisummary:: scPhyloX.tools.PhyloCircular.tree.internal_clades_angles scPhyloX.tools.PhyloCircular.tree.clade_angles scPhyloX.tools.PhyloCircular.tree.clade_depth scPhyloX.tools.PhyloCircular.tree.draw_label scPhyloX.tools.PhyloCircular.tree.draw_internal_wedge scPhyloX.tools.PhyloCircular.tree.draw_patch scPhyloX.tools.PhyloCircular.tree.draw_baseline scPhyloX.tools.PhyloCircular.tree.draw_depthline scPhyloX.tools.PhyloCircular.tree.draw_clade scPhyloX.tools.PhyloCircular.tree.polar_plot Module Contents --------------- .. py:function:: internal_clades_angles(clade, angles) .. py:function:: clade_angles(tree, arc, start) .. py:function:: clade_depth(tree) .. py:function:: draw_label(angle, depth, label, ax) .. py:function:: draw_internal_wedge(clade, angles, ax, depth) .. py:function:: draw_patch(angle, depth, ax, patch) .. py:function:: draw_baseline(node1, node2, ax, lc, lw=1) .. py:function:: draw_depthline(angle, depth, cdepth, ax, lc, lw=1) .. py:function:: draw_clade(clade, ax, angles, depths, lc, root_distance, mdepth, label_leaf, patch_leaf, wedge, pad_label, pad_patch, pad_wedge, lw=1) .. py:function:: polar_plot(tree, ax=None, arc=350, start=0, root_distance=0.1, label_leaf=True, patch_leaf=True, wedge=True, pad_label=0, pad_patch=0, pad_wedge=0, externals=[], lw=1)