scPhyloX.tools.PhyloCircular.externals

Classes

`Externals`
`Externals_background`
`Externals_labels`
`Externals_patchs`
`Externals_heatmap`

Module Contents

class Externals(offset=0, pad=0, size=None)

size = None

pad = 0

offset = 0

initial_depth = None

set_initial_depth(value)

set_size(mdepth)

fsize()

property depth

draw(ax, angles, tree, arc, start)

class Externals_background(bg_internal=False, **kwargs)

Bases: Externals

bg_internal = False

static get_wedge_angles(clade, angles)

from_internal(ax, angles, tree)

draw(ax, angles, tree, arc, start)

make_background(ax)

class Externals_labels(data=None, **kwargs)

Bases: Externals_background

data = None

draw(ax, angles, tree, arc, start)

class Externals_patchs(data=None, **kwargs)

Bases: Externals_background

data = None

draw(ax, angles, tree, arc, start)

class Externals_heatmap(data, cmap=None, row_order=None, wedges_kwargs={}, label=True, **kwargs)

Bases: Externals

data

cmap

norm

row_order

wedges_kwargs

label = True

draw(ax, angles, tree, arc, start)